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Table of JetSet best probe sets

JetSet best probe sets

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ROC analysis applied methods

 

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Fekete J.T., Ősz Á., Pete I., Nagy G.R., Vereczkey I. and Győrffy B. Predictive biomarkers of platinum and taxane
resistance using the transcriptomic data of 1816 ovarian cancer patients. Gynecol Oncol, 2020 Jan 20.  
doi:10.1016/j-ygno.2020.01.006. 

Menyhárt O, Fekete, J. T. and Gyorffy B. Gene expression indicates altered immune modulation and signaling pathway 
activation in ovarian cancer patients resistant to topotecan. Int J Mol Sci, 2019 Jun 5;20(11). pii:E2750. 
doi:10.3390/ijms.20112750 

Fekete, J. T. and B. Gyorffy . ROCplot.org: Validating predictive biomarkers of chemotherapy/hormonal 
therapy/anti-HER2 therapy using transcriptomic data of 3,104 breast cancer patients. Int J Cancer, 
2019 Apr 24. doi:10.1002/ijc.32369 

Menyhárt O, Harami-Papp H, Sukumar S, Schäfer R, Magnani L, de Barrios O, Győrffy B. 
Guidelines for the selection of functional assays to evaluate the hallmarks of cancer. 
Biochim Biophys Acta. 2016 Dec;1866(2):300-319. doi: 10.1016/j.bbcan.2016.10.002. 

Győrffy B, Hatzis C, Sanft T, Hofstatter E, Aktas B, Pusztai L. Multigene
prognostic tests in breast cancer: past, present, future. Breast Cancer Res. 
2015 Jan 27;17:11. doi: 10.1186/s13058-015-0514-2.

Li Q, Birkbak NJ, Gyorffy B, Szallasi Z, Eklund AC. Jetset: selecting the
optimal microarray probe set to represent a gene. BMC Bioinformatics. 
2011 Dec 15;12:474. doi: 10.1186/1471-2105-12-474.